FastQCFastQC Report
Mon 25 Mar 2013
85.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 85.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 28236885
Filtered Sequences 0
Sequence length 49
%GC 52

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 1289719 4.567497441732684 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 1075887 3.8102184430046018 RNA PCR Primer, Index 1 (100% over 27bp)
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 890373 3.153226710382537 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 724200 2.5647304934662585 RNA PCR Primer, Index 1 (100% over 26bp)
CACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 558321 1.9772754678853564 RNA PCR Primer, Index 1 (100% over 33bp)
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 545288 1.9311195268174943 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 346239 1.2261940366297486 RNA PCR Primer, Index 1 (100% over 28bp)
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 316771 1.1218340833275342 RNA PCR Primer, Index 1 (100% over 27bp)
CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCA 287084 1.0166985487244786 RNA PCR Primer, Index 7 (100% over 35bp)
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 276010 0.9774803417586606 RNA PCR Primer, Index 1 (100% over 28bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 272748 0.9659280759899684 RNA PCR Primer, Index 1 (100% over 27bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 259447 0.918823021732036 RNA PCR Primer, Index 1 (100% over 27bp)
CACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCAG 240917 0.85319963586635 RNA PCR Primer, Index 7 (100% over 36bp)
TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG 238612 0.8450365541383195 RNA PCR Primer, Index 1 (100% over 29bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 237915 0.842568151550711 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 235932 0.8355454222376157 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 221108 0.783046713545067 RNA PCR Primer, Index 1 (100% over 27bp)
AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA 211472 0.7489211363080595 RNA PCR Primer, Index 1 (100% over 28bp)
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 206607 0.7316918987345807 RNA PCR Primer, Index 1 (100% over 26bp)
ACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACC 183565 0.6500894131912922 RNA PCR Primer, Index 2 (100% over 34bp)
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 164720 0.5833504651805609 RNA PCR Primer, Index 1 (100% over 29bp)
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 131379 0.4652744096949787 RNA PCR Primer, Index 1 (100% over 28bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 128084 0.45360527551109125 RNA PCR Primer, Index 1 (100% over 27bp)
ATCTGTGATGACTTACATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 126308 0.44731562989331153 RNA PCR Primer, Index 1 (100% over 32bp)
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCA 124092 0.43946773873959544 No Hit
AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC 116891 0.41396563395714503 RNA PCR Primer, Index 1 (100% over 27bp)
AGAGGTAGTAGGTTGCATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 92256 0.3267215912803413 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 90467 0.3203859065899089 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGGGCAGAGAGCGAGACTTTTGGAATTCTCGGGTGCCAAGGAACTC 89272 0.3161538533729907 RNA PCR Primer, Index 1 (100% over 26bp)
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCC 86883 0.30769328840628135 No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCAA 76621 0.27135075274769155 No Hit
AGCTACATCTGGCTACTGGGTCTCTGGAATTCTCGGGTGCCAAGGAACT 76272 0.2701147807203238 RNA PCR Primer, Index 1 (100% over 25bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 75724 0.26817405673465755 RNA PCR Primer, Index 1 (100% over 25bp)
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATGGAATTCTCGGGTGCCAA 75675 0.26800052484542825 No Hit
TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT 75504 0.26739493396668934 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 70916 0.251146682787425 RNA PCR Primer, Index 1 (100% over 26bp)
CCCATAAAGTAGAAAGCACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 67951 0.24064623275548985 RNA PCR Primer, Index 1 (100% over 29bp)
TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC 61038 0.21616407050565242 RNA PCR Primer, Index 1 (100% over 26bp)
AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC 57888 0.20500844905519855 RNA PCR Primer, Index 1 (100% over 26bp)
AGCTACATCTGGCTACTGGGTCTTGGAATTCTCGGGTGCCAAGGAACTC 57685 0.20428953122839152 RNA PCR Primer, Index 1 (100% over 26bp)
CACTAGATTGAGAGCTCCTGGATGGAATTCTCGGGTGCCAAGGAACTCC 53435 0.18923829593809657 RNA PCR Primer, Index 1 (100% over 27bp)
AGAGGTAGTAGGTTGCATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 51050 0.18079189683989574 RNA PCR Primer, Index 1 (100% over 28bp)
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 48031 0.17010020758309566 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTTGGAATTCTCGGGTGCCAAGGAACTCCAG 47477 0.1681382347946666 RNA PCR Primer, Index 1 (100% over 29bp)
TTCACAGTGGCTAAGTTCTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 46638 0.16516694387500605 RNA PCR Primer, Index 1 (100% over 31bp)
TATTGCACTTGTCCCGGCCTGTTTGGAATTCTCGGGTGCCAAGGAACTC 45773 0.16210357481004015 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC 43940 0.1556120655660141 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 43927 0.15556602649336143 RNA PCR Primer, Index 1 (100% over 25bp)
CCACGTTCCCGTGGTGGAATTCTCGGGTGCCCAGGAACTCCAGTCACCA 43698 0.15475503052124906 RNA PCR Primer, Index 7 (97% over 35bp)
GAGAGATCAGAGGCGCAGAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 43564 0.15428047392621388 RNA PCR Primer, Index 1 (100% over 28bp)
ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC 43199 0.1529878384248121 RNA PCR Primer, Index 1 (100% over 26bp)
GAATACCGGGTGCTGTAGGCTTTGGAATTCTCGGGTGCCAAGGAACTCC 43183 0.15293117495077801 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC 43075 0.1525486965010482 RNA PCR Primer, Index 1 (100% over 26bp)
TGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCAGATCATCTCGTATG 42914 0.15197852029358053 RNA PCR Primer, Index 7 (100% over 49bp)
AATTCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCA 42830 0.15168103705490177 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGGGCAGAGAGCGAGACTTGGAATTCTCGGGTGCCAAGGAACTCCA 42221 0.1495242835744807 RNA PCR Primer, Index 1 (100% over 28bp)
CCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 40912 0.14488850310506984 RNA PCR Primer, Index 1 (100% over 32bp)
TTCACAGTGGCTAAGTTCCTGGAATTCTCGGGTGCCAAGGAACTCCAGT 40563 0.1436525310777021 RNA PCR Primer, Index 1 (100% over 30bp)
ACTGGACTTGGAGTCAGAAGGCATGGAATTCTCGGGTGCCAAGGAACTC 40320 0.14279195456580993 RNA PCR Primer, Index 1 (100% over 26bp)
ACTGGACTTGGAGTCAGAAGGTGGAATTCTCGGGTGCCAAGGAACTCCA 39924 0.14138953358346715 RNA PCR Primer, Index 1 (100% over 28bp)
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 38422 0.13607024995852057 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 37996 0.13456158496236392 RNA PCR Primer, Index 1 (100% over 27bp)
AAGCTGCCAGTTGAAGAACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 36156 0.128045285448448 RNA PCR Primer, Index 1 (100% over 29bp)
TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT 36130 0.12795320730314266 RNA PCR Primer, Index 1 (100% over 25bp)
TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 36031 0.127602602057557 RNA PCR Primer, Index 1 (100% over 28bp)
CCTGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 35590 0.12604081505449344 RNA PCR Primer, Index 1 (100% over 32bp)
CAAAGTGCTGTTCGTGCAGGTTGGAATTCTCGGGTGCCAAGGAACTCCA 35052 0.12413550574009846 RNA PCR Primer, Index 1 (100% over 28bp)
CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 34229 0.12122087829447192 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTGGAATTCTCGGGTGCCAAGGAACTCCA 34099 0.12076048756794527 RNA PCR Primer, Index 1 (100% over 28bp)
TTCACAGTGGCTAAGTTCTGCTGGAATTCTCGGGTGCCAAGGAACTCCA 33862 0.11992115985881588 RNA PCR Primer, Index 1 (100% over 28bp)
TCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 33533 0.11875601717399069 RNA PCR Primer, Index 1 (100% over 31bp)
AACATTCATTGCTGTCGGTGGGTTGGAATTCTCGGGTGCCAAGGAACTC 33012 0.11691091280075687 RNA PCR Primer, Index 1 (100% over 26bp)
TTGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTC 32863 0.11638323419881477 RNA PCR Primer, Index 1 (100% over 26bp)
CACGTTCCCGTGGTGGAATTCTCGGGTGCCACGGAACTCCAGTCACCAG 32400 0.1147435349189544 RNA PCR Primer, Index 7 (97% over 36bp)
CACTAGATTGAGAGCTCCTGGAATGGAATTCTCGGGTGCCAAGGAACTC 32094 0.11365984597805318 RNA PCR Primer, Index 1 (100% over 26bp)
AGCTACATTGTCTGCTGGGTTTGGAATTCTCGGGTGCCAAGGAACTCCA 31459 0.11141101435232674 RNA PCR Primer, Index 1 (100% over 28bp)
ACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCAGA 30716 0.10877970427687048 RNA PCR Primer, Index 7 (100% over 37bp)
ATTCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAG 30697 0.10871241640145506 RNA PCR Primer, Index 1 (100% over 29bp)
CAACAGCAGTCGATGGGCTGTTGGAATTCTCGGGTGCCAAGGAACTCCA 30342 0.10745519557132453 RNA PCR Primer, Index 1 (100% over 28bp)
CATAAAGTAGAAAGCACTACTTGGAATTCTCGGGTGCCAAGGAACTCCA 29912 0.1059323647066594 RNA PCR Primer, Index 1 (100% over 28bp)
AGCTACATCTGGCTACTGGGTCTCTTGGAATTCTCGGGTGCCAAGGAAC 29696 0.1051674078071997 RNA PCR Primer, Index 1 (100% over 24bp)
CGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCAGAT 29439 0.10425725075552773 RNA PCR Primer, Index 7 (100% over 38bp)
TTAATGCTAATCGTGATAGGGGTTGGAATTCTCGGGTGCCAAGGAACTC 28884 0.10229173649997157 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGGTTGTATAGTGGAATTCTCGGGTGCCAAGGAACTCCAG 28484 0.1008751496491203 RNA PCR Primer, Index 1 (100% over 29bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
AATTC 28553880 30.051447 321.43903 26
TTCTC 28354340 28.985119 311.60828 28
ATTCT 28401590 28.635244 307.7412 27
TGCCA 27676560 24.658646 270.03918 36
AACTC 21859950 24.349428 336.9424 44
GCCAA 26023085 24.202372 282.2176 37
TCTCG 28309210 24.162558 259.11414 29
CCAAG 25953810 24.137943 282.16498 38
GAATT 28598530 23.744566 254.3201 25
GAACT 25404295 22.323744 265.99286 43
ACTCC 18601755 21.008297 341.21912 45
CTCGG 28277055 20.151573 216.25323 30
GGAAT 28851595 20.000917 212.4219 24
TGGAA 28429035 19.707985 212.37161 23
GTGCC 26969305 19.219606 216.21495 35
CAAGG 25329095 18.583994 222.6322 39
AAGGA 25111970 18.172007 219.7694 40
AGGAA 24732890 17.89769 219.8103 41
GGAAC 24333840 17.853775 222.18117 42
TCGGG 28184415 15.845428 170.69736 31
CGGGT 28135340 15.817837 170.16927 32
GGTGC 27766355 15.610394 170.78833 34
CTCCA 12008645 13.562224 130.7527 45
GGGTG 28191325 12.503475 134.38988 33
TCCAG 9803125 8.734172 62.653763 45
CCAGT 9099715 8.107462 50.385925 42
TTGGA 11528430 7.6561103 119.808556 22
CAGTC 7105360 6.3305764 50.35656 43
AGTCA 6479420 5.693718 49.692852 44
CACCA 4012700 4.730593 47.34708 45
GTCAC 5074995 4.5216064 50.401882 45
TCACC 3917195 4.4239693 45.365585 44
GTGGA 7845735 4.350421 21.962664 21
ATGGA 5677070 3.93554 57.39097 22
CTGGA 5477230 3.8498015 28.468946 23
TCAGA 4213940 3.7029529 132.72618 8
TGATG 5535085 3.6758883 98.378685 14
TTATC 3580740 3.610198 149.01828 5
TATCA 3426215 3.6059098 155.58371 6
CTGAT 4186715 3.524449 124.80165 13
GACTG 4928940 3.4644232 104.63787 11
CTTAT 3387850 3.4157212 148.82596 4
ACTGA 3828325 3.3640978 130.17792 12
AGACT 3813285 3.350882 130.40091 10
CAGAC 3578830 3.3284361 137.8182 9
ATCAG 3683785 3.2370849 130.42657 7
TGTTG 5005980 3.1848214 92.64324 17
AGCTT 3653875 3.075895 124.15188 2
GTTGA 4497685 2.986944 87.413025 18
TAGCT 3526500 2.9686687 123.99398 1
GCTTA 3431330 2.888553 124.284355 3
CTTGG 4263960 2.871101 23.128416 23
ATGTT 3549985 2.8236117 117.68794 16
TTTGG 4176840 2.65732 58.16089 21
GTAGT 3854355 2.5597038 83.75316 5
TAGTA 3061405 2.5417993 104.666885 6
TCCCG 2794580 2.5244749 27.837074 12
GATGT 3789825 2.516849 98.535225 15
TAGTT 2925575 2.3269641 81.849655 18
AGTAG 3331255 2.3093405 87.43931 7
ACTTG 2693590 2.2675107 28.64636 7
TTCCC 2088715 2.2598212 30.009174 8
AGGTA 3145740 2.180735 88.49688 3
CGTGG 3734400 2.0994997 16.860771 12
ATAGT 2514040 2.0873375 88.2115 17
TTGTA 2597330 2.0658822 82.46546 13
ACCAG 2192465 2.0390685 29.460546 45
CCCGT 2257165 2.0390027 25.201597 10
TGTAT 2500945 1.9892188 80.47416 14
GTATA 2338895 1.9419193 82.53975 15
CCGTG 2720605 1.9388322 20.241339 11
GTTCC 2265955 1.9340442 23.698334 7
TATAG 2318915 1.9253305 81.95257 16
GTTTG 2958700 1.882335 53.943825 20
GTTGG 3512170 1.8656541 31.506926 21
GGTAG 3363065 1.8648028 70.1759 4
TGAGG 3350905 1.85806 70.25014 1
TTGAC 2156970 1.8157743 58.387913 19
AGTTT 2275560 1.8099507 57.55877 19
TGACT 2126745 1.7903306 51.39375 20
GAGGT 3212510 1.7813208 70.55951 2
ACTGG 2492545 1.7519447 25.018414 22
AGTTG 2635975 1.7505693 36.55666 9
CGTTC 2049925 1.749658 23.75363 6
CACGT 1951190 1.738428 24.702803 4
AGATT 2053085 1.7046195 64.03436 10
TAGAT 2044990 1.6978983 63.92455 9
CTGTT 2096305 1.6905589 47.507847 19
ATTGT 2121060 1.6870635 61.436886 12
GTAGA 2397320 1.6619046 54.208096 8
GATTG 2490300 1.6538255 52.131077 11
ACGTT 1930680 1.6252798 23.418772 5
GACTT 1921080 1.6171983 22.236208 21
AGAAC 1736445 1.5928061 50.554947 15
AAGAA 1747710 1.581153 50.050934 14
AACTG 1765835 1.5517079 46.696014 17
CCACG 1620845 1.5284034 26.0705 3
GATGG 2754855 1.5275533 39.35882 21
TGTGG 2866940 1.5229099 15.472237 20
CCAGA 1595735 1.4840889 14.833227 45
ACCAC 1246220 1.4691755 33.323166 2
GCTGT 2123885 1.4300998 15.812489 11
AAGCT 1600980 1.4068435 48.643753 1
AGCTG 1973060 1.3868123 38.466328 2
ACTGT 1596080 1.3436077 44.51018 18
TTGAT 1684805 1.3400718 49.147865 19
TTGAA 1579625 1.3115185 45.9989 11
CTGCC 1442800 1.3033487 49.693516 4
GGTGG 2928660 1.2989254 12.818683 15
CAGTT 1521230 1.2805977 46.21986 8
CCTGG 1788440 1.2745273 5.61294 17
TGGTG 2362250 1.2548201 14.907771 14
GTGGT 2360400 1.2538373 14.908727 13
CTGTG 1803515 1.2143816 9.792623 21
AGTGG 2186970 1.2126639 17.53094 6
GCCTG 1685580 1.2012242 21.649427 17
AGGCT 1699715 1.1946853 16.806623 18
GGCTT 1733400 1.1671702 18.47421 19
GCCAG 1555005 1.1567738 41.134083 6
GCTTG 1690885 1.138543 17.144083 20
CAGAT 1285610 1.1297156 10.175908 45
CATGG 1601585 1.1257122 6.7151527 16
TCTGA 1330495 1.1200336 6.551908 19
TTCAA 1053075 1.1083057 23.866838 1
AATCC 987780 1.1002715 21.003065 8
TTCTG 1329090 1.0718405 12.444339 16
CACTT 1000425 1.067535 35.666004 6
TGAAG 1532730 1.0625411 38.32562 12
GCTGG 1886185 1.0604233 7.959572 21
GAAGA 1464880 1.0600446 39.831905 13
GCACT 1183825 1.0547383 30.454052 5
CCTGT 1231945 1.0514933 24.789 18
GGCCT 1456060 1.0376575 21.90566 16
TGGCT 1525540 1.0272092 21.72142 8
TCACA 895060 0.9969922 37.900238 2
TGCTG 1446545 0.9740187 10.455508 16
GCTGC 1358615 0.9682135 38.972782 3
CAAGT 1079970 0.94901156 20.151419 3
TCCTT 924130 0.9446885 10.063679 11
ATTGC 1111285 0.9354989 29.131317 2
CCCAA 788135 0.9291366 20.628206 10
TTGCA 1095140 0.9219077 29.030539 3
TCTGG 1367445 0.9207574 7.673449 8
GCTAA 1045115 0.91838324 29.819952 10
ACAGT 998980 0.87784255 27.557007 4
AGATC 964600 0.8476316 7.1981483 45
CAGTG 1195625 0.8403736 22.113636 5
ACATT 797430 0.83925277 23.581253 2
GGCTG 1466105 0.8242521 7.8638344 20
AACAT 747465 0.8211701 24.442863 1
GGCTA 1161335 0.8162721 21.92565 9
CTTGT 1007300 0.81233394 27.10805 8
TTGTC 1004580 0.8101404 27.116575 9
TGCAC 907435 0.8084863 30.514526 4
CCCGG 1064690 0.8030402 22.942728 13
TTCAC 748160 0.7983477 32.918327 1
GTCCC 876980 0.792217 27.738111 11
GTAGG 1421975 0.788478 18.009394 8
CTGTA 936310 0.7882019 8.714228 19
CTAAG 891830 0.7836856 27.616804 11
CACAG 839640 0.7808943 29.255053 3
TATTG 975215 0.7756734 24.312979 1
GCCCA 815470 0.7689613 6.848179 8
CGGCC 1013210 0.7642115 23.020838 15
CCGGC 1008395 0.7605798 22.963427 14
GGACT 1078990 0.7583939 15.660264 4
TTTTG 990555 0.75477064 7.874277 14
GATCA 849525 0.7465106 5.321058 45
AGGTT 1123825 0.7463401 21.550055 10
CAGAA 813470 0.74617964 19.460447 15
CAGGA 1014430 0.74428886 16.9253 12
TAGGC 1058390 0.7439146 15.839798 17
GTGCT 1100670 0.74112666 10.517756 15
CAACG 795110 0.73947984 17.720987 7
GGTTG 1378315 0.7321568 17.321884 11
CATTC 686050 0.7320713 24.33117 3
AAGTA 830485 0.71977097 19.784698 4
AAGTT 866755 0.71964264 25.404089 13
ATTCA 676105 0.7115647 23.577076 4
AGTTC 840220 0.7073117 24.737267 14
CCAGG 949880 0.70661914 14.197853 11
TGTCC 827275 0.7060981 25.409544 10
ATCTG 838540 0.70589745 9.648893 7
TAAGT 849610 0.70540756 25.92515 12
TAGGT 1055555 0.7010014 20.812098 9
CTTCT 684390 0.6996152 7.3746595 17
AGGAT 1008760 0.6993071 15.85207 13
TTGTG 1096100 0.6973425 10.255178 13
TATGG 1047000 0.69531995 8.542986 22
GTTGT 1092485 0.69504267 15.823036 12
GTAAT 835595 0.6937713 19.163488 6
TCGGT 1018915 0.6860777 15.232135 15
CTGTC 795315 0.6788196 19.477043 12
ATAGG 925960 0.6419073 19.70139 16
ATCCC 567775 0.64122903 18.703913 8
CTTTT 649370 0.62720346 9.577925 13
CATCT 586490 0.6258326 11.154822 6
GAATC 710300 0.6241682 11.684816 6
AACGC 671105 0.62415093 18.061987 8
TAATC 587220 0.618018 19.844645 7
GGGGC 1280750 0.6012 6.912899 4
GCTAC 672475 0.5991469 12.134004 2
AAAGC 648460 0.5948193 11.923709 14
AGTAA 683930 0.5927535 19.680172 5
CCTTC 546010 0.59073883 7.8519716 16
GTGGC 1050420 0.5905517 18.440025 7
TCAAC 527620 0.5877069 21.434269 6
GGCCC 772755 0.58284885 5.5919805 7
AGCAG 779420 0.5718616 9.712015 16
AAGCA 623245 0.57169014 12.145345 15
CATTG 676790 0.5697335 6.2264485 6
ATCCA 510745 0.5689102 20.754515 9
ACGGA 770630 0.5654124 10.668711 3
CTGGC 793035 0.5651544 8.187748 9
GTCGG 1003020 0.5639031 12.844216 14
AAGTC 641465 0.56368023 6.404857 12
CTCCT 517700 0.56010973 10.497091 10
TTTGT 721860 0.55003387 13.949583 12
CGGAA 747760 0.5486326 9.758903 4
TCAAG 622030 0.5466019 20.056198 2
TACAT 519030 0.5462516 14.3615675 4
TGGAC 773030 0.54334253 15.2647505 3
GAAGG 938280 0.54309034 12.147992 17
CTACT 507485 0.54152787 11.38573 13
GGGCT 959145 0.5392364 5.4908385 18
ACATC 483155 0.53817815 11.805923 5
GTCCT 628320 0.5362854 6.2627263 14
ATCGA 605160 0.5317776 6.289171 23
GTCAG 755860 0.5312742 15.040869 13
CGCTG 745465 0.5312537 13.796075 10
AGAAT 612790 0.5310974 8.703472 4
CAAAA 460545 0.52814883 15.552274 12
CCAAA 453860 0.5277199 14.9344635 11
TGAGT 793400 0.52690244 11.497696 19
GTTCT 653190 0.526763 12.3197155 15
CTACA 471515 0.5252126 15.525724 3
GATAG 757510 0.52513194 17.94259 15
TAGTG 788045 0.5233462 5.709002 15
GGATA 751130 0.52070916 15.740888 14
AAAAG 574155 0.5194379 11.921355 13
ACGCT 573410 0.51088417 17.10628 9
AGTCC 571720 0.50937843 6.434796 13
AGCTC 570250 0.50806874 5.487453 13
CGGTG 901950 0.5070811 12.790761 16
TCTGT 625320 0.50428736 7.0504932 17
AGAGC 669500 0.49121317 11.3836565 11
TGATC 580110 0.4883466 6.054091 21
GAGTC 692350 0.48663473 15.106325 11
AGAAG 671885 0.48620236 15.342195 16
TCCCA 428985 0.48448354 14.560275 9
GAGTT 729365 0.4843764 7.5873647 20
GGTCT 714740 0.48126405 6.6795597 19
TCTCC 443340 0.47965813 10.756031 9
AAGGC 652505 0.4787439 12.676512 18
GGAGT 861160 0.47750893 12.130866 10
TCCTG 559400 0.47746068 5.2607436 16
TGGAG 848255 0.47035316 12.175767 9
CCTTT 459845 0.47007486 10.145079 12
ATCTC 440315 0.46985203 6.0113 24
ACATG 531040 0.46664545 6.2216406 15
AAAGA 513145 0.4642422 8.943366 2
TACTG 550165 0.4631384 8.957171 14
GTGAG 828680 0.4594989 9.928647 18
GCAGC 605540 0.45046344 9.5549135 17
CAAAG 489545 0.44904974 11.442707 1
CTGGG 797880 0.4485724 5.9863386 16
AGGCC 602685 0.4483396 5.1911335 27
GGTGA 798115 0.4425508 10.479955 17
GTTAT 554445 0.44099826 6.542122 20
TCCGT 512320 0.43727684 10.264032 17
TGTCG 644660 0.4340763 15.09305 13
TGTTT 569525 0.4339595 9.226966 19
GTCCG 605945 0.43182513 7.2182407 6
GAGAG 739635 0.4281117 9.07167 10
CTGGT 635520 0.42792195 6.2196627 3
CAGCT 478400 0.42623425 11.976824 18
GAGAC 575590 0.42231128 7.059353 16
TGGGT 787080 0.41809452 5.6532836 17
AACGG 567820 0.41661042 10.592065 2
CAGAG 566925 0.41595376 9.453868 8
ATTGA 499500 0.41472092 5.4143715 7
GCAGA 543490 0.39875945 7.4630156 7
TGCCC 437050 0.39480767 5.380023 28
AGCTA 444700 0.3907752 11.949044 1
AGAGG 670870 0.3883095 6.33821 1
TGTAA 467685 0.3883058 6.276095 1
GTGAT 581300 0.38604537 6.536869 5
TTCCG 449670 0.38380364 10.746501 16
CACTA 338840 0.37742814 6.626194 1
ACTTT 365615 0.36862284 6.4087534 19
TCCGA 407040 0.3626555 8.302626 7
GATGA 520030 0.36050266 6.7028785 7
TGGGC 640500 0.3600925 5.7642546 17
GTAAA 413825 0.3586569 6.51977 2
AAACA 312550 0.35842952 8.58496 4
CCATA 319585 0.3559803 5.352904 2
GGTCC 495465 0.35309187 6.9357886 5
TCTCT 342370 0.34998646 5.4387403 21
CAGCA 372460 0.34640074 6.245051 4
GGGCA 581570 0.34130213 6.0191836 5
TGGTC 506805 0.3412528 6.143247 4
TTATG 422895 0.3363652 6.548926 21
TAAAC 301955 0.3317298 8.501558 3
CCCAT 291975 0.3297483 5.3085923 1
CATAG 374885 0.329426 9.372191 16
TGTGC 488240 0.32875222 10.334764 14
TTGGG 618055 0.32830897 5.605142 16
CCGAA 352315 0.32766515 6.570581 8
TCTCA 298590 0.31861988 5.9224453 25
AGAGA 432280 0.31281477 6.975214 9
CCCCT 261930 0.2999297 5.1318784 15
ACTAG 331310 0.29113495 5.2534175 2
AGCGA 395735 0.2903514 7.08904 13
CTCAA 259925 0.28952605 6.077239 26
CGAGA 386780 0.28378108 7.075526 15
ACTTA 267630 0.2816664 6.8113728 11
CATCC 248560 0.28071663 8.319032 7
GAGCG 474110 0.2782378 5.7538476 12
CTAGA 316490 0.27811205 5.0942965 3
GCTCC 303200 0.27389473 5.4219255 14
GGCAG 459595 0.26971948 5.9251943 6
GGGTC 474730 0.26689574 5.6209707 18
ATAAA 244900 0.26535892 5.1707315 4
TCAAT 248230 0.26124892 5.7458177 27
ATGAC 294110 0.2584459 6.4997344 8
TGCAT 302700 0.25481808 6.970812 14
TATCT 236535 0.23848093 5.7100058 23
CATAA 213170 0.23418997 5.1283436 3
GCATA 249445 0.21919702 7.2062006 15
GCGAG 367275 0.21554022 5.6896906 14
CTTAC 197705 0.21096735 6.7099833 12
TTACA 177245 0.18654098 6.5739264 13
GTTGC 266650 0.17954649 5.626913 12